Accepted papers

List of Accepted full papers

Diego Mariano, Mívian Ferreira, Bruno Sousa, Lucianna Santos, and Raquel de Melo-Minardi. A brief history of Bioinformatics told by data visualization

Elvismary Molina De Armas, Maristela Holanda, Daniel de Oliveira, Nalvo F. Almeida, and Sérgio Lifschitz. A classification of De Bruijn Graph Algorithms for De Novo Fragment Assembly Methods

Fernanda M. Demarqui, Ana Carolina S. Paiva, Mariana M. Santoni, Tatiana F. Watanabe, Sandro Roberto Valentini, and Cleslei Fernando Zanelli. Polysome-seq as a Measure of Translational Pro-file from Deoxyhypusine Synthase Mutant in Saccharomyces cerevisiae

Gabriel Oliveira, Rafael Padilha, André Dorte, Luis Cereda, Luiz Miyazaki, Maurício Lopes and Zanoni Dias. COVID-19 X-ray Image Diagnostic with Deep Neural Networks

Guilherme Sato, Leodécio Braz, and Zanoni Dias. Classification of Musculoskeletal Abnormalities with Convolutional Neural Networks 

Gustavo Dias, Marta Mattoso, Bruno Lopes, and Daniel de Oliveira. Experiencing DfAnalyzer for Runtime Analysis of Phylogenomic Dataflows

Iago Blanco, Carlos Leonardo Araújo, and Adriana Folador. In silico Pathogenomic Analysis of Corynebacterium pseudotuberculosis biovar ovis

Janaina S. Fortirer, Adriana Grandis, Camila T. Castanho, and Marcos  Buckeridge. Importance of meta-analysis in studies involving plant responses to climate change in Brazil

Jorge Francisco Cutigi, Renato Feijo Evangelista, Rodrigo Henrique Ramos, Cynthia Oliveira Lage Ferreira, Adriane Feijo Evangelista, Andre C. P. L. F. de Carvalho, and Adenilso Simao. Combining mutation and gene network data in a machine learning approach for false-positive cancer driver gene discovery

Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, and Zanoni Dias. Sorting by Reversals and Transpositions with Proportion Restriction

Leodécio Braz, Vinicius Teixeira, Helio Pedrini, and Zanoni Dias. ImTeNet: Image-Text Classification Network for Abnormality Detection and Automatic Reporting on Musculoskeletal Radiographs

Manuela M. do Almo, Isabel G. Sousa, Waldeyr Mendes Cordeiro Da Silva, Thomas Gatter, Peter F. Stadler, Steve Hoffmann, Andrea Maranhão, and Marcelo Brigido. Anti-CD3 stimulated T cell transcriptome reveals novel ncRNAs and correlates with a suppressive profile

Marcus Braga, Kenny Pinheiro, Fabrício Araújo, Fábio Miranda, Artur Silva, and Rommel Ramos. Redundancy Treatment of NGS Contigs in Microbial Genome Finishing with Hashing-Based Approach

Matheus Ferraz, Wenny Adan, and Roberto Lins. Unraveling the role of Nanobodies Tetrad on their Folding and Stability Assisted by Machine and Deep Learning Algorithms

Murilo Montanini Breve and Fabrício Martins Lopes. A simplified complex network-based approach to mRNA and ncRNA transcript classification

Pedro Olímpio Pinheiro, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Cid Carvalho de Souza, and Zanoni Dias. Heuristics for Breakpoint Graph Decomposition with Applications in Genome Rearrangement Problems

Priscila Biller, João Paulo Pereira Zanetti, and Joao Meidanis. Center Genome With Respect to the Rank Distance 

Sergio Lifschitz, Edward Hermann Haeusler, and Julio Omar Prieto Entenza. Efficient Out-of-core Contig Generation

Shivananda Kandagalla, Sharath Belenahalli Shekarappa, Maria Grishina, Vladimir Potemkin, and Pavan Gollapalli. A systems biology driven approach to map the EP300 interactors using comprehensive protein interaction network

Waldeyr Mendes Cordeiro Da Silva, Daniela P. de Andrade, Jakob Andersen, Maria Emilia Walter, Marcelo Brigido, Peter F. Stadler, and Christoph Flamm. Computational Simulations for Cyclizations Catalyzed by Plant Monoterpene Synthases

List of Accepted short papers

Alex Trentin, Beatriz Metzner, Glécio Oliveira Barros, Deborah Leite. A scientometric overview of bioinformatics tools in the Pseudomonas putida genome study

Gerda Cristal Villalba Silva, Luis Soares, Ursula Matte. Oncogenic signaling pathways in Mucopolysaccharidoses

Jesus Alvarado-Huayhuaz, Fabian Jimenez, Gerson Cordova-Serrano, Ihosvany Camps, Wilmar Puma-Zamora. Natural products as potential inhibitors for SARS-CoV-2 papain like protease: an in silico study

Levy Alves, William Castillo-Ordoñez, Silvana Giuliatti. Analyzing switch regions of human Rab10 by molecular dynamics simulations

Renata Cavalcante, J. Miguel Ortega, Jorge de Souza, Tetsu Sakamoto. Assessing the sex-related genomic composition difference using a K-mer-based approach: a case of study in Arapaima gigas (Pirarucu)

Instructions for authors of all accepted papers

Authors will have until *October 20, 2020* to submit files described here. These files should be sent to setubal@iq.usp.br and waldeyr.mendes@ifg.edu.br

1) The corresponding author of each paper, acting on behalf of all of the authors of that paper, must complete and sign a Consent-to-Publish form, available here.

The corresponding author signing the copyright form should match the corresponding author marked on the paper. Once the files have been sent to Springer, changes relating to the authorship of the papers cannot be made.

2) Source files for the paper (LaTeX) and a PDF of the paper

The authors should submit a revised version of their paper based on reviewers’ comments. It is entirely up to the authors to decide which changes they want to implement; there will be no additional review.

The format to be used is Lecture Notes in Computer Science (LNCS). Authors should consult Springer’s authors’ guidelines and use their proceedings templates in LaTeX for the preparation of their papers.

Springer needs all source files (LaTeX files with all the associated style files, special fonts, and eps files) and the final PDFs of all of the papers. For papers prepared using LaTeX, authors should supply the underlying bib file for the references. Please note that Springer cannot include hyperlinks in references.

Nota bene: If for whatever reason the final files of a paper do not comply with these instructions, that paper may be left out of the proceedings.

Springer encourages authors to include their ORCIDs in their papers.

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Papers should not make reference to supplementary material that is not included in the paper itself.

3) Other instructions

The corresponding author must be available to carry out a proof check of the paper. He or she will be given a 72-hour time-slot to do so.