Proceedings
You can access the proceedings of the Brazilian Symposium on BIoinformatics 2022:
Accepted works
- Papers
Full papers
BDDBlast A Memory Efficient Architecture for Pairwise Alignments
Demian Oliveira, Alessandra Faria-Campos, Sergio Campos
Accuracy of RNA Structure Prediction Depends on the Pseudoknot Grammar
Carlos Daniel Andrade, Thomas Fontanari, Mariana Recamonde-Mendoza
Study on the complexity of omics data: an analysis for cancer survival prediction
Carlos Daniel Andrade, Thomas Fontanari, Mariana Recamonde-Mendoza
Identifying large scale conformational changes in proteins through distance maps and convolutional networks
Lucas Moraes dos Santos, Raquel de Melo-Minardi
Cluster analysis indicates genes involved in progesterone-induced oxidative stress in pancreatic beta cells: insights to understanding gestational diabetes
Lara Santos, Patricia Oliveira
An External Memory Approach for Large Genome De Novo Assembly
Elvismary Molina de Armas, Sergio Lifschitz
A non Exhaustive search of Exhaustiveness
Letícia Cecotti, Mauricio Balboni, Oscar Arrua, Karina dos Santos Machado, Adriano Werhli
Search for Zinc complexes with high affinity in Pyrazinamidase from Mycobacterium Tuberculosis resistant to Pyrazinamide
Jesus Alvarado-Huayhuaz, Daniel Alonso Talaverano Rojas, Reneé Isabel Huamán Quispe, Mauricio Balboni, Oscar Arrua, Adriano Werhli, Karina dos Santos Machado, Ana Cecilia Valderrama Negrón
Phylogeny trees as a tool to compare inference algorithms of orthologs genes
Rafael Oliveira, Saul Leite, Fernanda Almeida
A 1.375-Approximation Algorithm for Sorting by Transpositions with Faster Running Time
Alexsandro Alexandrino, Klairton de Lima Brito, Andre Oliveira, Ulisses Dias, Zanoni Dias
Short papers
Cancer gene graphs on interactive scientific workflow
Diogo Vieira, Elvismary Molina de Armas, Cristovao Lanna, Mariana Boroni, Sergio Lifschitz, Alexandre Heine
Comparison of machine learning pipelines for gene expression matrices
Mateus Devino, Kele Belloze, Eduardo Bezerra
Evaluating Machine Learning Models for Essential Protein Identification
Jéssica Costa, Jorge Gabriel Rodrigues, Kele Belloze
Computational methodology for discovery of potential inhibitory peptides
Vivian Paixão, Raquel de Melo-Minardi
How bioinformatics can aid biodiversity description: the case of a probable new species of Orthonychiurus (Collembola, Hexapoda)
Maithe Magalhaes, Marilia Alves Figueira Melo, Gabriel Costa Queiroz, Aline dos Santos Moreira, Wim Degrave, Thiago Parente
Water pollution shifts the soil and fish gut microbiomes increasing the circulation of antibiotic resistance genes in the environment
Maithe Magalhaes, Marilia Alves Figueira Melo, Aline dos Santos Moreira, Wim Degrave, Thiago Parente
In silico analysis of the genomic potential for the production of specialized metabolites of ten strains of the Bacillales order isolated from the soil of the Federal District, Brazil
Felipe de Araújo Mesquita, Waldeyr Silva, Marlene Teixeira De-Souza
- Posters
Developing a Predictor of aggregation region in proteins with machine learning and tertiary structure
Carlos Moreira, Eric Philot, Ana Scott
Comparative transcriptomics for identification of key genes among xylose fermenting yeasts through interaction networks and co-expression analysis
Alexandra Russolo Cardelli, Gonçalo Pereira, Lucas Miguel de Carvalho
Comparative genomic and co-occurrence network analysis of plant growth-promoting genes in the genus Paraburkholderia
Francisnei Pedrosa-Silva
Comparative genomics reveals novel species potential and niche segregation of Campylobacter
Sarah Henaut Jacobs
Impact of human contamination on the patterns of co-occurrence of a microbiome
Pedro Almeida, Henrique Fragoso, André Torres, Marcelo Gomes, Ernesto Caffarena
Mathematical Modelling for Microbial Community Induced Metabolic Diseases (MATOMIC)
Natasha Andressa Nogueira Jorge
Taxonomic characterization of the microbial community of photovoltaic panel using Metagenomics
Viviane Jotta, Carla Silva
Analysis of Metagenome-assembled genomes recovered from inocula and mature compost at the composting facility at the São Paulo Zoo Park
Suzana Sato Guima, Layla Martins, Aline Maria da Silva, João Setubal
Survey of Cannabis sativa L. RNA-Seq data available in public databases
Kevelin Xavier
Bioinformatics applied to function inference of gene subfamilies related to oil biosynthesis in legumes
Dayana Kelly de Moraes
Convergence, evolution and metabolism: enzymatic activities as Darwinian evolutionary units and genes encoding non-homologous isofunctional enzymes as Mendelian alleles
Fernanda Oliveira, Fernando Alvarez Valín, Antonio de Miranda, Marcos Catanho, Ana Carolina Guimaraes
Genetic variation at sites of Post-Translational Modification in the Polygenic Risk Model for Alzheimer’s disease -associated phenotypes
Samantha Lucciola Paço
Prediction of drug-target interactions for Brazilian herbal medicines and hallucinogens, by computational approaches
Ronald Martins, Marcelo Gomes, Ernesto Caffarena
Multi-omic approach for characterization of tentacle and mucus composition of sea anemone Bunodosoma caissarum
Maria Eduarda Mazzi Esquinca, Leandro Mantovani de Castro
In embryo and in silico positioning of a novel gene in sensory neurons gene regulatory network
Vitória Samartin Botezelli, Carolina Purcell Goes, Ana Elisa Ribeiro Orsi, Chao Yun Irene Yan
Comparative analysis and genomic diversity of the genus Azospirillum
Isabella Oliveira-Pinheiro, Francisnei Pedrosa-Silva
A multi-omic approach to identify RNAi targets for the control of Meloidogyne incognita in agriculture
Giovana de Oliveira
What can unmapped reads uncover about sugarcane during biotic stress
Joel Junior, Raquel Mirando, Marcelo Zerillo, Henrique Dias, Marie-Anne Sluys
PHEMALE-Bacteria: genome-based tool for prediction of bacteria phenotypes with machine learning
Bruno Koshin Iha
Contact profile optimization: a novel approach for rational design of inhibitory peptides against SARS-COV2
Ana Paula Abreu, Frederico Carvalho, Adriano de Paula Sabino, Raquel de Melo-Minardi
Genome assembly of Vellozia tubiflora and V. peripherica: A story about charting unknown genomes in the era of Big Data
Felipe Ciamponi, Mariana Feitosa Cavalheiro, Stephen Richards, Harris Lewin, Paulo Arruda, Ricardo Dante, Isabel Gerhardt
Identification and characterization of OSCA gene family in Vellozia intermedia and V. nivea
Mariana Feitosa Cavalheiro, Lucas Canesin, Diego Riaño-Pachón, Paulo Arruda, Ricardo Dante, Isabel Gerhardt
Cosmopolitism Analysis of Metagenome-Assembled Genomes from São Paulo Zoo environments
Robson Oliveira, Fábio Beltrame Sanchez, Layla Martins, Aline Maria da Silva, João Setubal
Bacterial 2`-Deoxyguanosine Riboswitch Classes as Potential Targets for Antibiotics: A Structure and Dynamics Study
Deborah Antunes dos Santos, Lucianna Santos, Ernesto Caffarena, Ana Carolina Guimaraes
Creating PERCI data repository of non-coding RNAs involved in colorectal cancer with search application of BERT
Jaqueline Coelho, Maria Emilia Walter, Maristela Holanda, Li Weigang, João Batista de Sousa, Lucas Maciel Vieira
- Software Demo
Mini-Docking A simple script to fast execute the Virtual Screening Process
Lucas Rolim Medaglia, Tiago Oliveira, Eduardo Habib Maia, Alisson Silva, Alex Taranto
OLATCG: expanding the frontiers for the use of Bioinformatics
Luiz Miguel Viana Barbosa, Anna Mendes, Guilherme Matos, Kele Belloze
