{"id":944,"date":"2022-09-15T19:56:41","date_gmt":"2022-09-15T19:56:41","guid":{"rendered":"https:\/\/bsb.sbc.org.br\/2022\/?page_id=944"},"modified":"2023-01-17T18:57:27","modified_gmt":"2023-01-17T18:57:27","slug":"accepted-works","status":"publish","type":"page","link":"https:\/\/bsb.sbc.org.br\/2022\/accepted-works\/","title":{"rendered":"Accepted works"},"content":{"rendered":"\n

<\/p>\n\n\n\n

Proceedings <\/h2>\n\n\n\n

You can access the proceedings of the Brazilian Symposium on BIoinformatics 2022:<\/p>\n\n\n\n

\n
Proceedings \/ Artigos BSB 2022<\/strong><\/a><\/div>\n<\/div>\n\n\n\n

<\/p>\n\n\n\n

\n\n\n\n

Accepted works<\/h2>\n\n\n\n
  • Papers <\/mark><\/strong><\/li><\/ul>\n\n\n\n

    Full papers<\/mark><\/strong><\/p>\n\n\n\n

    BDDBlast A Memory Efficient Architecture for Pairwise Alignments
    <\/strong>Demian Oliveira, Alessandra Faria-Campos, Sergio Campos<\/p>\n\n\n\n

    Accuracy of RNA Structure Prediction Depends on the Pseudoknot Grammar<\/strong>
    Carlos Daniel Andrade, Thomas Fontanari, Mariana Recamonde-Mendoza<\/p>\n\n\n\n

    Study on the complexity of omics data: an analysis for cancer survival prediction
    <\/strong>Carlos Daniel Andrade, Thomas Fontanari, Mariana Recamonde-Mendoza<\/p>\n\n\n\n

    Identifying large scale conformational changes in proteins through distance maps and convolutional networks
    <\/strong>Lucas Moraes dos Santos, Raquel de Melo-Minardi<\/p>\n\n\n\n

    Cluster analysis indicates genes involved in progesterone-induced oxidative stress in pancreatic beta cells: insights to understanding gestational diabetes
    <\/strong>Lara Santos, Patricia Oliveira<\/p>\n\n\n\n

    An External Memory Approach for Large Genome De Novo Assembly
    <\/strong>Elvismary Molina de Armas, Sergio Lifschitz<\/p>\n\n\n\n

    A non Exhaustive search of Exhaustiveness
    <\/strong>Let\u00edcia Cecotti, Mauricio Balboni, Oscar Arrua, Karina dos Santos Machado, Adriano Werhli<\/p>\n\n\n\n

    Search for Zinc complexes with high affinity in Pyrazinamidase from Mycobacterium Tuberculosis<\/em> resistant to Pyrazinamide
    <\/strong>Jesus Alvarado-Huayhuaz, Daniel Alonso Talaverano Rojas, Rene\u00e9 Isabel Huam\u00e1n Quispe, Mauricio Balboni, Oscar Arrua, Adriano Werhli, Karina dos Santos Machado, Ana Cecilia Valderrama Negr\u00f3n<\/p>\n\n\n\n

    Phylogeny trees as a tool to compare inference algorithms of orthologs genes
    <\/strong>Rafael Oliveira, Saul Leite, Fernanda Almeida<\/p>\n\n\n\n

    A 1.375-Approximation Algorithm for Sorting by Transpositions with Faster Running Time
    <\/strong>Alexsandro Alexandrino, Klairton de Lima Brito, Andre Oliveira, Ulisses Dias, Zanoni Dias<\/p>\n\n\n\n

    <\/p>\n\n\n\n

    Short papers<\/mark><\/strong><\/p>\n\n\n\n

    Cancer gene graphs on interactive scientific workflow
    <\/strong>Diogo Vieira, Elvismary Molina de Armas, Cristovao Lanna, Mariana Boroni, Sergio Lifschitz, Alexandre Heine<\/p>\n\n\n\n

    Comparison of machine learning pipelines for gene expression matrices
    <\/strong>Mateus Devino, Kele Belloze, Eduardo Bezerra<\/p>\n\n\n\n

    Evaluating Machine Learning Models for Essential Protein Identification
    <\/strong>J\u00e9ssica Costa, Jorge Gabriel Rodrigues, Kele Belloze<\/p>\n\n\n\n

    Computational methodology for discovery of potential inhibitory peptides
    <\/strong>Vivian Paix\u00e3o, Raquel de Melo-Minardi<\/p>\n\n\n\n

    How bioinformatics can aid biodiversity description: the case of a probable new species of Orthonychiurus<\/em> (Collembola, Hexapoda)
    <\/strong>Maithe Magalhaes, Marilia Alves Figueira Melo, Gabriel Costa Queiroz, Aline dos Santos Moreira, Wim Degrave, Thiago Parente<\/p>\n\n\n\n

    Water pollution shifts the soil and fish gut microbiomes increasing the circulation of antibiotic resistance genes in the environment
    <\/strong>Maithe Magalhaes, Marilia Alves Figueira Melo, Aline dos Santos Moreira, Wim Degrave, Thiago Parente<\/p>\n\n\n\n

    In silico<\/em> analysis of the genomic potential for the production of specialized metabolites of ten strains of the Bacillales<\/em> order isolated from the soil of the Federal District, Brazil
    <\/strong>Felipe de Ara\u00fajo Mesquita, Waldeyr Silva, Marlene Teixeira De-Souza<\/p>\n\n\n\n

    <\/p>\n\n\n\n

    \n\n\n\n
    • Posters <\/mark><\/strong><\/li><\/ul>\n\n\n\n

      Developing a Predictor of aggregation region in proteins with machine learning and tertiary structure
      <\/strong>Carlos Moreira, Eric Philot, Ana Scott<\/p>\n\n\n\n

      Comparative transcriptomics for identification of key genes among xylose fermenting yeasts through interaction networks and co-expression analysis
      <\/strong>Alexandra Russolo Cardelli, Gon\u00e7alo Pereira, Lucas Miguel de Carvalho<\/p>\n\n\n\n

      Comparative genomic and co-occurrence network analysis of plant growth-promoting genes in the genus Paraburkholderia<\/em>
      <\/strong>Francisnei Pedrosa-Silva<\/p>\n\n\n\n

      Comparative genomics reveals novel species potential and niche segregation of Campylobacter<\/em>
      <\/strong>Sarah Henaut Jacobs<\/p>\n\n\n\n

      Impact of human contamination on the patterns of co-occurrence of a microbiome
      <\/strong>Pedro Almeida, Henrique Fragoso, Andr\u00e9 Torres, Marcelo Gomes, Ernesto Caffarena<\/p>\n\n\n\n

      Mathematical Modelling for Microbial Community Induced Metabolic Diseases (MATOMIC)
      <\/strong>Natasha Andressa Nogueira Jorge<\/p>\n\n\n\n

      Taxonomic characterization of the microbial community of photovoltaic panel using Metagenomics
      <\/strong>Viviane Jotta, Carla Silva<\/p>\n\n\n\n

      Analysis of Metagenome-assembled genomes recovered from inocula and mature compost at the composting facility at the S\u00e3o Paulo Zoo Park
      <\/strong>Suzana Sato Guima, Layla Martins, Aline Maria da Silva, Jo\u00e3o Setubal<\/p>\n\n\n\n

      Survey of Cannabis sativa<\/em> L. RNA-Seq data available in public databases
      <\/strong>Kevelin Xavier<\/p>\n\n\n\n

      Bioinformatics applied to function inference of gene subfamilies related to oil biosynthesis in legumes
      <\/strong>Dayana Kelly de Moraes<\/p>\n\n\n\n

      Convergence, evolution and metabolism: enzymatic activities as Darwinian evolutionary units and genes encoding non-homologous isofunctional enzymes as Mendelian alleles
      <\/strong>Fernanda Oliveira, Fernando Alvarez Val\u00edn, Antonio de Miranda, Marcos Catanho, Ana Carolina Guimaraes<\/p>\n\n\n\n

      Genetic variation at sites of Post-Translational Modification in the Polygenic Risk Model for Alzheimer’s disease -associated phenotypes
      <\/strong>Samantha Lucciola Pa\u00e7o<\/p>\n\n\n\n

      Prediction of drug-target interactions for Brazilian herbal medicines and hallucinogens, by computational approaches
      <\/strong>Ronald Martins, Marcelo Gomes, Ernesto Caffarena<\/p>\n\n\n\n

      Multi-omic approach for characterization of tentacle and mucus composition of sea anemone Bunodosoma caissarum<\/em>
      <\/strong>Maria Eduarda Mazzi Esquinca, Leandro Mantovani de Castro<\/p>\n\n\n\n

      In embryo and in silico positioning of a novel gene in sensory neurons gene regulatory network
      <\/strong>Vit\u00f3ria Samartin Botezelli, Carolina Purcell Goes, Ana Elisa Ribeiro Orsi, Chao Yun Irene Yan<\/p>\n\n\n\n

      Comparative analysis and genomic diversity of the genus Azospirillum<\/em>
      <\/strong>Isabella Oliveira-Pinheiro, Francisnei Pedrosa-Silva<\/p>\n\n\n\n

      A multi-omic approach to identify RNAi targets for the control of Meloidogyne incognita<\/em> in agriculture
      <\/strong>Giovana de Oliveira<\/p>\n\n\n\n

      What can unmapped reads uncover about sugarcane during biotic stress
      <\/strong>Joel Junior, Raquel Mirando, Marcelo Zerillo, Henrique Dias, Marie-Anne Sluys<\/p>\n\n\n\n

      PHEMALE-Bacteria: genome-based tool for prediction of bacteria phenotypes with machine learning
      <\/strong>Bruno Koshin Iha<\/p>\n\n\n\n

      Contact profile optimization: a novel approach for rational design of inhibitory peptides against SARS-COV2
      <\/strong>Ana Paula Abreu, Frederico Carvalho, Adriano de Paula Sabino, Raquel de Melo-Minardi<\/p>\n\n\n\n

      Genome assembly of Vellozia tubiflora and V. peripherica<\/em>: A story about charting unknown genomes in the era of Big Data
      <\/strong>Felipe Ciamponi, Mariana Feitosa Cavalheiro, Stephen Richards, Harris Lewin, Paulo Arruda, Ricardo Dante, Isabel Gerhardt<\/p>\n\n\n\n

      Identification and characterization of OSCA gene family in Vellozia intermedia and V. nivea<\/em>
      <\/strong>Mariana Feitosa Cavalheiro, Lucas Canesin, Diego Ria\u00f1o-Pach\u00f3n, Paulo Arruda, Ricardo Dante, Isabel Gerhardt<\/p>\n\n\n\n

      Cosmopolitism Analysis of Metagenome-Assembled Genomes from S\u00e3o Paulo Zoo environments
      <\/strong>Robson Oliveira, F\u00e1bio Beltrame Sanchez, Layla Martins, Aline Maria da Silva, Jo\u00e3o Setubal<\/p>\n\n\n\n

      Bacterial 2`-Deoxyguanosine Riboswitch Classes as Potential Targets for Antibiotics: A Structure and Dynamics Study
      <\/strong>Deborah Antunes dos Santos, Lucianna Santos, Ernesto Caffarena, Ana Carolina Guimaraes<\/p>\n\n\n\n

      Creating PERCI data repository of non-coding RNAs involved in colorectal cancer with search application of BERT
      <\/strong>Jaqueline Coelho, Maria Emilia Walter, Maristela Holanda, Li Weigang, Jo\u00e3o Batista de Sousa, Lucas Maciel Vieira<\/p>\n\n\n\n

      <\/p>\n\n\n\n

      \n\n\n\n
      • Software Demo<\/strong><\/mark><\/li><\/ul>\n\n\n\n

        Mini-Docking A simple script to fast execute the Virtual Screening Process
        <\/strong>Lucas Rolim Medaglia, Tiago Oliveira, Eduardo Habib Maia, Alisson Silva, Alex Taranto<\/p>\n\n\n\n

        OLATCG: expanding the frontiers for the use of Bioinformatics
        <\/strong>Luiz Miguel Viana Barbosa, Anna Mendes, Guilherme Matos, Kele Belloze<\/p>\n","protected":false},"excerpt":{"rendered":"

        Proceedings  You can access the proceedings of the Brazilian Symposium on BIoinformatics 2022: Accepted works Papers Full papers BDDBlast A Memory Efficient Architecture for Pairwise AlignmentsDemian Oliveira, Alessandra Faria-Campos, Sergio Campos Accuracy of RNA Structure Prediction Depends on the Pseudoknot GrammarCarlos Daniel Andrade, Thomas Fontanari, Mariana Recamonde-Mendoza Study on the complexity of omics data: an […]<\/p>\n","protected":false},"author":8,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-944","page","type-page","status-publish","hentry","entry"],"_links":{"self":[{"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/pages\/944","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/users\/8"}],"replies":[{"embeddable":true,"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/comments?post=944"}],"version-history":[{"count":9,"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/pages\/944\/revisions"}],"predecessor-version":[{"id":1097,"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/pages\/944\/revisions\/1097"}],"wp:attachment":[{"href":"https:\/\/bsb.sbc.org.br\/2022\/wp-json\/wp\/v2\/media?parent=944"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}