XVIII Brazilian Symposium on Bioinformatics – BSB 2025
September, 29th to October, 2nd
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OVERALL PROGRAM |
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30/09/2025 |
01/10/2025 |
02/10/2025 |
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08:00-08:30 |
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BSB – ST2 |
BSB – ST4 |
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08:30-09:00 |
BSB – ST2 |
BSB – ST4 |
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09:00-09:30 |
BSB – ST2 |
BSB – ST4 |
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09:30-10:00 |
BSB – ST2 |
BSB – ST4 |
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10:00-10:30 |
COFFEE-BREAK |
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10:30-11:00 |
BSB - ST1 |
Keynote - Antonio Camargo |
BSB – ST5 |
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11:00-11:30 |
BSB - ST1 |
Keynote - Antonio Camargo |
BSB – ST5 |
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11:30-12:00 |
BSB - ST1 |
Keynote - Antonio Camargo |
BSB – ST5 |
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12:00-12:30 |
Lunch (not included) |
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12:30-13:00 |
Lunch (not included) |
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13:00-13:30 |
Lunch (not included) |
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13:30-14:00 |
Lunch (not included) |
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14:00-14:30 |
BSB - Posters |
BSB - ST3 (Best Papers) |
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14:30-15:00 |
BSB - Posters |
BSB - ST3 (Best Papers) |
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15:00-15:30 |
BSB - Posters |
CEBioComp Meeting |
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15:30-16:00 |
BSB - Posters |
CEBioComp Meeting |
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16:00-16:30 |
COFFEE-BREAK |
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16:30-17:00 |
Keynote - André Carvalho |
Keynote - Jing Qin |
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17:00-17:30 |
Keynote - André Carvalho |
Keynote - Jing Qin |
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17:30-18:00 |
Keynote - André Carvalho |
Keynote - Jing Qin |
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18:00-18:30 |
Opening Session |
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18:30-19:00 |
Opening Session |
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19:00-19:30 |
Welcome Reception |
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19:30-20:00 |
Welcome Reception |
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ST1 – SHORT PAPERS |
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TIME SLOT |
TITLE |
AUTHORS |
TYPE |
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10:30-10:45 |
A machine learning approach for virtual screening of histone deacetylase inhibitor compounds using aromatic signatures |
Alessandra Cioletti, Diego Mariano (UFMG), Raquel C. de Melo-Minardi (UFMG) |
SHORT PAPER |
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10:45-11:00 |
A Shuffle-Based Statistical Approach for Robust Pseudogene Annotation |
Pedro Barcelos (Pontificia Universidade Católica do Rio de Janeiro PUC-Rio), Marcos Catanho (FioCruz), Antonio B de Miranda (FioCruz), Edward Hermann Haeusler (PUC), Sergio Lifschitz (Pontificia Universidade Católica do Rio de Janeiro PUC-Rio) |
SHORT PAPER |
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11:00-11:15 |
Evaluation of Phenotype-driven Variant Prioritization Methods for Cardiogenetic Diagnosis in the Brazilian Population |
Manuela Bonetto (InCor, HC-FMUSP), Ed Carlos S. Silva (USP), Juliana José (InCor, HC-FMUSP), Rogerio S. Rosa, José S. L. Patané (InCor, HC-FMUSP) |
SHORT PAPER |
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11:15-11:30 |
Integrated genome and gene diversity analyses of Xanthomonas in metagenomic data |
Mariana Louise Gabas (USP), Arthur Henrique Barrios Solano (USP), Joao C. Setúbal (USP) |
SHORT PAPER |
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11:30-11:45 |
Leveraging Sample-Specific Strings to Enhance Fusion Transcript Detection |
Luísa Penze (UNICAMP), João Meidanis (UNICAMP), Lucas Oliveira (UNICAMP) |
SHORT PAPER |
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11:45-12:00 |
PhysiBoSS-Models: A database for multiscale models |
Vincent Noël (Institut Curie), Marco Ruscone, Randy Heiland (Indiana University), Arnau Montagud (I2SysBio), Alfonso Valencia, Emmanuel Barillot, Paul Macklin (Indiana University), Laurence Calzone |
SHORT PAPER |
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ST2 - Computational Methods for Structural and Molecular Biology |
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TIME SLOT |
TITLE |
AUTHORS |
TYPE |
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08:00-08:20 |
A Hybrid Metaheuristic for Molecular Docking |
Osmar Aguiar Ribeiro Junior (UFMA), Omar Andres Carmona Cortes (IFMA), Joao Otavio Bandeira Diniz (IFMA) |
FULL PAPER |
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08:20-08:40 |
From Sequence to Stability – Rational Insulin Design via Genetic Algorithms and Deep Learning Models in Structural Bioinformatics |
Mateus R. Gomes, Gabriel Vasconcelos Fruet, Ingryd Medeiros, Roner F. da Costa, Eveline M. Bezerra, Danielo G. Gomes. |
FULL PAPER |
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08:40-09:00 |
GA-Channel-Xception: Genetic Algorithm-Based Color Channel Selection for Deep Learning Detection of Oral Squamous Cell Carcinoma |
Joao Otavio Bandeira Diniz (IFMA), Breno Augusto Tamanini, André Farias Alvino, Luana Batista da Cruz (UFCA), Josenildo Silva (IFMA), Omar Andres Carmona Cortes (IFMA), Daniel Lima Gomes Jr. (Instituto Federal de Educação, Ciência e Tecnologia do Maranhão), Antonio Oseas de Carvalho Filho (UFPI) |
FULL PAPER |
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09:00-09:20 |
Approximations for the Weighted Reversal, Transposition, and Indel Distance Problem with Intergenic Region Information |
Gabriel Siqueira (UNICAMP), Alexsandro Oliveira Alexandrino (UNICAMP), Zanoni Dias (University of Campinas) |
FULL PAPER |
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09:20-09:40 |
Molecular Dynamics and Quantum Machine Learning Model to Classify Polymorphisms in Multiple Sclerosis |
Diego Rueda (UNAERP), Levy Bueno Alves (USP), Milton Faria Junior (UNAERP), Silvana Giuliatti (University of São Paulo) |
FULL PAPER |
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09:40-10:00 |
Using Protein Language Models Embeddings to predict O-GlcNAc glycosylation sites |
Adenilson Arcanjo de Moura Junior (IFCE, Instituto Federal de Educação, Ciência e Tecnologia do Ceará.), Diego Mariano (UFMG), Luana Bastos (UFMG), Ana Luísa Bastos (DCC/UFMG), Milenna Pirovani (UFMG), Raquel C. de Melo-Minardi (UFMG) |
FULL PAPER |
ST3 – Best Papers |
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TIME SLOT |
TITLE |
AUTHORS |
TYPE |
14:00-14:20 |
DEP: Dual-Path Embeddings for Protein Toxicity Classification |
Andre Gambogi (UFMG), Arthur buzelin (UFMG), Gabriela Miserani, Guilherme Evangelista (UFMG), Pedro Bento (UFMG), Yan Aquino Amorim (DCC/UFMG), Samira Malaquias, Pedro Rigueira (UFMG), Pedro Robles Dutenhefner (UFMG), Wagner Meira Jr. (UFMG), Gisele Pappa (UFMG) |
FULL PAPER |
14:20-14:40 |
Mapping Relevant Genes in Severe Asthma: A Computational Strategy for Biomarker Discovery |
Milenna Pirovani (UFMG), Leonardo Henrique da Silva (UFMG), João Vítor Dias, Luana Bastos (UFMG), Letícia Gontijo (UFMG), Rafael Lemos, Diego Mariano (UFMG), Marcos A. dos Santos (UFMG), Raquel Melo-Minardi |
FULL PAPER |
14:40-15:00 |
Towards an automated pipeline to model a complex-network-driven analysis of microRNAs in cancer: a TCGA-BRCA case study |
Mylena Roberta (UNICAMP), Murilo Geraldo (UNICAMP), André Santanchè (UNICAMP) |
FULL PAPER |
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ST4 - Artificial Intelligence in Bioinformatics and Computational Biology |
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TIME SLOT |
TITLE |
AUTHORS |
TYPE |
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08:00-08:20 |
Comparative Analysis of Supervised Algorithms for Protein Cluster Classification Using k-mer Image Embeddings |
Giovanna Soares (UFRN), Hannah Isabele, Matheus Dalmolin, Raquel Barbosa, Marcelo A. C. Fernandes (UFRN) |
FULL PAPER |
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08:20-08:40 |
Exploring Machine Learning for Early Autism Spectrum Disorder Prediction Using Umbilical Cord Blood Gene Expression |
Laura Galant Speggiorin (UFRGS), Thayne Woycinck Kowalski, Mariana Recamonde-Mendoza (UFRGS) |
FULL PAPER |
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08:40-09:00 |
Multi-Class Ovarian Cancer Subtype Classification in Histopathological Images Using Swin Transformer |
Juliany Pereira Costa (UFMA), Igor Rafael Barbosa Estrela (UFMA), Antonio Oseas de Carvalho Filho (UFPI), Anselmo Cardoso de Paiva (UFMA), Aristófanes Corrêa Silva (UFMA), Joao Otavio Bandeira Diniz (IFMA) |
FULL PAPER |
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09:00-09:20 |
Predicting sepsis prognosis with machine learning models trained on MIMIC-IV |
Felipe Miranda (ITA), Sarah Negreiros (ITA), Fábio Agostini (ISCMSP) |
FULL PAPER |
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09:20-09:40 |
Methodological Insights into Cancer Driver Gene Prediction: Comparing Graph-Based and Traditional ML Approaches |
Renan Soares de Andrades (UFRGS, Universidade Federal do Rio Grande do Sul), Mariana Recamonde-Mendoza (UFRGS) |
FULL PAPER |
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09:40-10:00 |
Development of Predictive Models with Random Forest and XGBoost for Risk Stratification in Stroke Patients |
Douglas Tranquilino (IFPE-Palmares), Marcos Vinícius (Instituto Federal de Pernambuco / IFPE), Rafael Carli, Gustavo Rau de Almeida Callou (Federal Rural University of Pernambuco), Eduardo Antonio Guimaraes Tavares (Federal University of Pernambuco), Thiago Valentim Bezerra (Instituto Federal de Educação, Ciências e Tecnologia de Pernambuco / Universidade Federal de Pernambuco) |
FULL PAPER |
ST5 - Genomics, RNA, and Computational Biology |
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TIME SLOT |
TITLE |
AUTHORS |
TYPE |
10:30-10:50 |
A multi-level approach using deep learning and transfer learning for classifying non-coding RNAs |
Mirele Costa (Universidade de Brasilia, UnB), Celia G. Ralha (University of Brasilia), Marcelo Macedo Brigido (UnB), André Ponce de Leon F de Carvalho (ICMC), Peter Florian Stadler (University of Leipzig), Maria Emilia Machado Telles Walter (UnB) |
FULL PAPER |
10:50-11:10 |
Ribosome Role in Regulating Concurrency of mRNA Translation |
Luis Henrique Costa Neto (PUCRIO), Sergio Lifschitz (Pontificia Universidade Católica do Rio de Janeiro PUC-Rio), Marcos Catanho (FioCruz), Antonio B de Miranda (FioCruz), Edward Hermann Haeusler (PUC) |
FULL PAPER |
11:10-11:30 |
Brazilian Biodiversity Natural Products Database: BrNPDB |
Fillipe Alfredo Neves (ICMC/University of São Paulo), Alan Pilon, Edgard Marx (University of Leipzig), Vanderlan da Silva Bolzani, Marilia Valli, Thomas Riechert (HTWK Leipzig University of Applied Sciences) |
FULL PAPER |
11:30-11:45 |
Unveiling Novel Secondary Metabolite Gene Clusters in a Paecilomyces sp. Strain from the Brazilian Amazon through Computer Aided Genomic Analysis |
Daniel Oliveira (Ufam), Gleucinei Castro, Sabrina Sousa, Thiago Sousa, Miguel V. de Oliveira (Ufam), Gilvan Ferreira da Silva |
FULL PAPER |
11:45-12:00 |
Awards and Closing Ceremony |
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