Proceedings
BSB 2023 proceedings are under preparation and will be made available to the authors some weeks after the conference.
BSB 2023 Technical Sessions
Technical Session 1 (June 14, 16:30 – 18:00)
Chair: Prof. Dr. Edward Haeusler (PUC-RJ)
Block Interchange and Reversal Distance on Unbalanced Genomes
Alexsandro Oliveira Alexandrino, Gabriel Siqueira, Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, and Zanoni Dias
circTIS: a weighted degree string kernel with support vector machine tool for translation initiation sites prediction in circRNA
Denilson Fagundes Barbosa, Liliane Santana Oliveira, and André Yoshiaki Kashiwabara
Evaluating the molecular-electronic structure and the antiviral effect of functionalized heparin on graphene oxide through ab initio computer simulations and molecular docking
André Flores dos Santos, Mirkos Ortiz Martins, Mariana Zancan Tonel, Solange Binotto Fagan
Victor Chavauty Villela, Eduardo Silva Lira, and André Fujita
Technical Session 2 (June 15, 11:30 – 13:00)
Chair: Prof. Dr. André Fujita (USP)
Feature Selection Investigation in Machine Learning Docking Scoring Functions
Maurı́cio Dorneles Caldeira Balboni, Oscar Emilio Arrua, Adriano V. Werhli, and Karina dos Santos Machado
Using natural language processing for context identification in COVID-19 literature
Frederico Carvalho, Diego Mariano, Marcos Bomfim, Giovana Fiorini, Luana Bastos, Ana Paula Abreu, Vivian Paixão, Lucas Santos, Juliana Silva, Angie Puelles, Alessandra Silva, Raquel Cardoso de Melo-Minardi
A framework for inference and selection of cell signaling pathway dynamic models
Marcelo Batista, Fabio Montoni, Cristiano Campos, Ronaldo Nogueira, Hugo A. Armelin, and Marcelo S. Reis
Intentional Semantics for Molecular Biology
E.H. Haeusler, B. Cuconato, Luiz A.Glatzl, M.L. Guateque, D.M. Vieira, E.M. de Armas, F. Baião, M. Catanho, A.B. de Miranda, and S. Lifschitz
transcAnalysis: A Snakemake Pipeline for Differential Expression and Post-Transcriptional Modification Analysis
Pedro H. A. Barros, Waldeyr M. C. Silva and Marcelo M. Brigido
Technical Session 3 (June 16, 11:30 – 13:00)
Chair: Prof. Dr. Fábio Vicente (UTFPR)
Make No Mistake! Why Do Tools Make Incorrect Long Non-Coding Rna Classification?
Alisson G. Chiquitto, Lucas Otávio L. Silva, Liliane Santana Oliveira, Douglas S. Domingues, and Alexandre R. Paschoal
Peptide-protein interface classification using convolutional neural networks
Lucas Moraes dos Santos, Diego Mariano, Luana Luiza Bastos, Alessandra Gomes Cioletti, and Raquel Cardoso de Melo Minardi
A Power Law Semantic Similarity from Gene Ontology
Eric Augusto Ito, Fábio Fernandes da Rocha Vicente, Luiz Filipe Protasio Pereira, and Fabricio Martins Lopes
Gene Networks Inference by Reinforcement Learning Approach
Rodrigo Cesar Bonini and David Correa Martins-Jr
Exploring Identifiability in Hybrid Models of Cell Signaling Pathways
Ronaldo N. Sousa, Cristiano G.S. Campos, Willian Wang, Ronaldo F. Hashimoto, Hugo A. Armelin, and Marcelo S. Reis
